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  5. Solyc12g027800.1.1

Solyc12g027800.1.1 (Solyc12g027800)


Aliases : Solyc12g027800

Description : Rhodanese-like domain-containing protein 8, chloroplastic OS=Arabidopsis thaliana (sp|f4i933|str8_arath : 197.0)


Gene families : OG0006271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g027800.1.1

Target Alias Description ECC score Gene Family Method Actions
AT1G17850 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001437.2 No alias Rhodanese-like domain-containing protein 8,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020556.19 No alias Rhodanese-like domain-containing protein 8,... 0.01 OrthoFinder output from all 47 species
LOC_Os03g64350.1 LOC_Os03g64350 Rhodanese-like domain-containing protein 8,... 0.04 OrthoFinder output from all 47 species
Zm00001e006452_P001 Zm00001e006452 Rhodanese-like domain-containing protein 8,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR040503 TRHO_N 73 161
No external refs found!