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Aliases : SMG7, Solyc12g019960
Description : SMG7 Nonsense-Mediated mRNA Decay protein
Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G19400 | SMG7 | Telomerase activating protein Est1 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g021472 | SMG7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055840 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02607 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05541 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02690 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15194 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23897 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18431.t1 | SMG7, Aspi01Gene18431 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41024.t1 | SMG7, Aspi01Gene41024 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene41028.t1 | SMG7, Aspi01Gene41028 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15989 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g39122 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G021400.1 | SMG7, Ceric.27G021400 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre16.g648750 | SMG7 | Protein SMG7 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12623 | SMG7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16006 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02039 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g41012 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01033622001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037278001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_21699 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32124 | SMG7 | Protein SMG7 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g48171 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_32980g0010 | SMG7 | Protein SMG7 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g12080.1 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g18455 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g13643 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07446 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11325 | SMG7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0205.g025727 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25590 | No alias | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo410159 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009613_P002 | SMG7, Zm00001e009613 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |