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  5. Solyc12g019180.2.1

Solyc12g019180.2.1 (Solyc12g019180)


Aliases : Solyc12g019180

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 459.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 234.3)


Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g019180.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00074p00182020 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s04606p00004600 evm_27.TU.AmTr_v1... Polygalacturonase OS=Prunus persica 0.03 OrthoFinder output from all 47 species
AT1G05650 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G05660 No alias Pectin lyase-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT2G43860 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43870 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43880 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G43890 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G59850 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01038241001 No alias Polygalacturonase OS=Prunus persica 0.04 OrthoFinder output from all 47 species
Solyc02g067630.3.1 Solyc02g067630 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species
Solyc02g067640.3.1 Solyc02g067640 Polygalacturonase OS=Prunus persica... 0.05 OrthoFinder output from all 47 species
Solyc08g014540.1.1 Solyc08g014540 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g019120.2.1 Solyc12g019120 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Solyc12g019220.1.1 Solyc12g019220 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species
Solyc12g019230.2.1 Solyc12g019230 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species
Zm00001e019002_P001 Zm00001e019002 Polygalacturonase OS=Prunus persica... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 57 381
No external refs found!