Solyc12g019130.3.1 (Solyc12g019130)

Aliases : Solyc12g019130

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 362.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 239.7)

Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g019130.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00074p00182020	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT1G05650	No alias	Pectin lyase-like superfamily protein	0.05	OrthoFinder output from all 47 species
GSVIVT01004007001	No alias	Polygalacturonase OS=Prunus persica	0.05	OrthoFinder output from all 47 species
LOC_Os11g14410.1	LOC_Os11g14410	Polygalacturonase OS=Prunus persica...	0.03	OrthoFinder output from all 47 species
Solyc02g067630.3.1	Solyc02g067630	Polygalacturonase OS=Prunus persica...	0.04	OrthoFinder output from all 47 species
Solyc12g019140.3.1	Solyc12g019140	Polygalacturonase OS=Prunus persica...	0.05	OrthoFinder output from all 47 species
Zm00001e019002_P001	Zm00001e019002	Polygalacturonase OS=Prunus persica...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	52	376

External Links

No external refs found!

Solyc12g019130.3.1 (Solyc12g019130)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation