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  5. Solyc12g014250.2.1

Solyc12g014250.2.1 (PEPC1, ATPEPC1,...)


Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1, Solyc12g014250

Description : PEP carboxylase


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g014250.2.1

Target Alias Description ECC score Gene Family Method Actions
Als_g06370 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01523.t1 PEPC1, ATPEPC1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0091.g042910 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: CDS=48-2978 0.03 OrthoFinder output from all 47 species
Cba_g32641 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29803 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g10417 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021135 PEP_COase 164 965
No external refs found!