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Aliases : Solyc12g010585
Description : no hits & (original description: none)
Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc12g010585.1.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00269160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00041060 | evm_27.TU.AmTr_v1... | Nutrient uptake.copper uptake.regulation.bHLH-Ib... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00154030 | ORG2, BHLH038,... | Nutrient uptake.copper uptake.regulation.bHLH-Ib... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G10585 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT1G12540 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G20970 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G25400 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G25410 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G51780 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g39845 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g30730 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007772001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018460001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020561001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_26737 | No alias | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g01870.1 | LOC_Os01g01870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_14544g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_938775g0010 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g45090 | ORG3, BHLH039 | bHLH-Ib-class transcriptional regulator of copper/iron... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g47256 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g48171 | No alias | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g50631 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006910.3.1 | Solyc03g006910 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g035490.3.1 | Solyc06g035490 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g074805.1.1 | Solyc09g074805 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0009916 | alternative oxidase activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |