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  5. Solyc12g009000.1.1

Solyc12g009000.1.1 (Solyc12g009000)


Aliases : Solyc12g009000

Description : Protein ALP1-like OS=Arabidopsis thaliana (sp|q9m2u3|alpl_arath : 151.0)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009000.1.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.19 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.05 OrthoFinder output from all 47 species
Adi_g030966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g07409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14285.t1 Aspi01Gene14285 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25549.t1 Aspi01Gene25549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29075.t1 Aspi01Gene29075 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene54158.t1 Aspi01Gene54158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72408.t1 Aspi01Gene72408 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_33567 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.14 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g14130.1 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 273 429
No external refs found!