Solyc12g008700.3.1 (Solyc12g008700)

Aliases : Solyc12g008700

Description : component RPS30 of SSU proteome

Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g008700.3.1
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00068p00064720	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
AT2G19750	No alias	Ribosomal protein S30 family protein	0.12	OrthoFinder output from all 47 species
AT4G29390	No alias	Ribosomal protein S30 family protein	0.14	OrthoFinder output from all 47 species
AT5G56670	No alias	Ribosomal protein S30 family protein	0.14	OrthoFinder output from all 47 species
Ceric.05G056700.1	Ceric.05G056700	component *(eS30) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001003.33	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Cre16.g666301	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
LOC_Os02g56014.1	LOC_Os02g56014	component RPS30 of SSU proteome	0.1	OrthoFinder output from all 47 species
LOC_Os06g07580.1	LOC_Os06g07580	component RPS30 of SSU proteome	0.11	OrthoFinder output from all 47 species
MA_10432727g0010	No alias	component RPS30 of SSU proteome	0.05	OrthoFinder output from all 47 species
Mp8g09080.1	No alias	component RPS30 of SSU proteome	0.08	OrthoFinder output from all 47 species
Pp3c1_420V3.1	Pp3c1_420	Ribosomal protein S30 family protein	0.03	OrthoFinder output from all 47 species
Pp3c2_28870V3.1	Pp3c2_28870	Ribosomal protein S30 family protein	0.02	OrthoFinder output from all 47 species
Pp3c2_29010V3.1	Pp3c2_29010	Ribosomal protein S30 family protein	0.04	OrthoFinder output from all 47 species
Smo227173	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0031503	protein-containing complex localization	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0033566	gamma-tubulin complex localization	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
CC	GO:0070469	respirasome	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006846	Ribosomal_S30	3	59

External Links

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Solyc12g008700.3.1 (Solyc12g008700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation