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  5. Solyc12g008600.2.1

Solyc12g008600.2.1 (Solyc12g008600)


Aliases : Solyc12g008600

Description : no hits & (original description: none)


Gene families : OG0001281 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g008600.2.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00137950 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G10020 No alias Protein of unknown function (DUF1005) 0.05 OrthoFinder output from all 47 species
AT3G19680 No alias Protein of unknown function (DUF1005) 0.16 OrthoFinder output from all 47 species
Adi_g010390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02416 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g07113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g16796 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g08654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08380 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g00630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26067.t1 Aspi01Gene26067 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38747.t1 Aspi01Gene38747 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0304.g063867 No alias not classified & original description: CDS=296-1813 0.05 OrthoFinder output from all 47 species
Azfi_s1467.g103473 No alias not classified & original description: CDS=933-2456 0.03 OrthoFinder output from all 47 species
Dac_g38745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009267001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01037021001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_07943 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39789 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g53790.1 LOC_Os01g53790 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g04150.1 LOC_Os07g04150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_23754g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g09520.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g02026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g077140.3.1 Solyc04g077140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g19210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g26179 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e011533_P001 Zm00001e011533 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e019865_P002 Zm00001e019865 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010410 DUF1005 1 415
No external refs found!