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  5. Solyc12g007010.2.1

Solyc12g007010.2.1 (HCF101, Solyc12g007010)


Aliases : HCF101, Solyc12g007010

Description : HCF101 protein involved in PS-I assembly. scaffold protein HCF101 of plastidial SUF system transfer phase


Gene families : OG0004803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g007010.2.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00060790 HCF101,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.1 OrthoFinder output from all 47 species
AT3G24430 HCF101 ATP binding 0.09 OrthoFinder output from all 47 species
Adi_g075712 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.1 OrthoFinder output from all 47 species
Aev_g11015 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Ala_g13945 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Als_g18429 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.08 OrthoFinder output from all 47 species
Als_g19035 HCF101 protein involved in PS-I assembly *(HCF101) & original... 0.08 OrthoFinder output from all 47 species
Als_g32492 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Aob_g14161 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.09 OrthoFinder output from all 47 species
Aop_g25561 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.17 OrthoFinder output from all 47 species
Aspi01Gene57116.t1 HCF101, Aspi01Gene57116 protein involved in PS-I assembly *(HCF101) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024765 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Ceric.05G039700.1 HCF101, Ceric.05G039700 scaffold protein HCF101 of plastidial SUF system... 0.13 OrthoFinder output from all 47 species
Cre01.g045902 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Dac_g13357 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.12 OrthoFinder output from all 47 species
Dcu_g01706 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Ehy_g06869 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.08 OrthoFinder output from all 47 species
GSVIVT01015424001 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.21 OrthoFinder output from all 47 species
Gb_01824 HCF101 Fe-S cluster assembly factor HCF101, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_01825 HCF101 Fe-S cluster assembly factor HCF101, chloroplastic... 0.07 OrthoFinder output from all 47 species
Gb_01826 HCF101 HCF101 protein involved in PS-I assembly 0.08 OrthoFinder output from all 47 species
LOC_Os01g52170.1 HCF101, LOC_Os01g52170 HCF101 protein involved in PS-I assembly. scaffold... 0.12 OrthoFinder output from all 47 species
Len_g45512 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.12 OrthoFinder output from all 47 species
Lfl_g12880 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.09 OrthoFinder output from all 47 species
Mp3g25470.1 HCF101 HCF101 protein involved in PS-I assembly. scaffold... 0.06 OrthoFinder output from all 47 species
Msp_g12150 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.06 OrthoFinder output from all 47 species
Nbi_g10499 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Ore_g30871 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
Pnu_g25839 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Ppi_g57975 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.09 OrthoFinder output from all 47 species
Sam_g25149 No alias scaffold protein HCF101 of plastidial SUF system... 0.06 OrthoFinder output from all 47 species
Smo91144 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 OrthoFinder output from all 47 species
Spa_g12261 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.1 OrthoFinder output from all 47 species
Tin_g02764 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.12 OrthoFinder output from all 47 species
Zm00001e008773_P004 HCF101, Zm00001e008773 HCF101 protein involved in PS-I assembly. scaffold... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002744 MIP18-like 86 159
IPR010376 GBBH-like_N 442 520
IPR033756 YlxH/NBP35 180 416
No external refs found!