Solyc12g006820.1.1 (KCS11, Solyc12g006820)

Aliases : KCS11, Solyc12g006820

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g006820.1.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.05	OrthoFinder output from all 47 species
AT2G16280	KCS9	3-ketoacyl-CoA synthase 9	0.03	OrthoFinder output from all 47 species
AT2G26250	KCS10, FDH	3-ketoacyl-CoA synthase 10	0.04	OrthoFinder output from all 47 species
Aev_g13090	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14972	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g30134	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g09935	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g10952	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g17568	KCS4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g32874	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00689	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g19664	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene07650.t1	KCS11, Aspi01Gene07650	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12655.t1	KCS1, Aspi01Gene12655	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68170.t1	KCS11, Aspi01Gene68170	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0020.g015540	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1581	0.03	OrthoFinder output from all 47 species
Azfi_s0051.g031196	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1425	0.04	OrthoFinder output from all 47 species
Azfi_s0104.g044813	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1584	0.02	OrthoFinder output from all 47 species
Azfi_s0132.g049256	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1740	0.06	OrthoFinder output from all 47 species
Azfi_s0132.g049270	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1533	0.04	OrthoFinder output from all 47 species
Azfi_s0149.g053157	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1668	0.03	OrthoFinder output from all 47 species
Azfi_s0166.g054413	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1767	0.02	OrthoFinder output from all 47 species
Cba_g06228	KCS4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.01G120500.1	KCS9, Ceric.01G120500	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.02G063100.1	KCS4, Ceric.02G063100	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.03G088600.1	KCS10, FDH,...	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.05G086300.1	KCS1, Ceric.05G086300	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.38G000100.1	KCS10, FDH,...	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g27648	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g22693	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022919001	KCS7	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
GSVIVT01026270001	KCS21	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
GSVIVT01034244001	KCS15	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
LOC_Os02g11070.1	KCS11, LOC_Os02g11070	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
LOC_Os06g39750.1	KCS11, LOC_Os06g39750	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_339700g0010	KCS9	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_8048664g0010	KCS8	3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_9089774g0010	KCS8	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g13333	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.05	OrthoFinder output from all 47 species
Pp3c11_22150V3.1	Pp3c11_22150	3-ketoacyl-CoA synthase 11	0.01	OrthoFinder output from all 47 species
Ppi_g09046	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g13963	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g19004	KCS2	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015383	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1527	0.03	OrthoFinder output from all 47 species
Solyc06g053870.4.1	KCS20, Solyc06g053870	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Spa_g06424	KCS9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g50894	KCS4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g04520	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e015733_P001	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.05	OrthoFinder output from all 47 species
Zm00001e038586_P001	KCS1, Zm00001e038586	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	389	469
IPR013601	FAE1_typ3_polyketide_synth	83	372

External Links

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Solyc12g006820.1.1 (KCS11, Solyc12g006820)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation