1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g006805.1.1

Solyc12g006805.1.1 (Solyc12g006805)


Aliases : Solyc12g006805

Description : Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana (sp|q9sr77|hbpl1_arath : 81.3)


Gene families : OG0005649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005649_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006805.1.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Adi_g022351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01251 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27280.t1 Aspi01Gene27280 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.37G062400.1 Ceric.37G062400 not classified & original description: pacid=50616994... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.136 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g304400 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.07 OrthoFinder output from all 47 species
Dcu_g39518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015471001 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.07 OrthoFinder output from all 47 species
Gb_04672 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.07 OrthoFinder output from all 47 species
LOC_Os06g39690.1 LOC_Os06g39690 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Len_g04218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_85577g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g02650.1 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g30566 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo438881 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g05175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037352_P002 Zm00001e037352 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 70 179
IPR006917 SOUL_haem-bd 214 376
No external refs found!