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  5. Solyc12g005320.3.1

Solyc12g005320.3.1 (Solyc12g005320)


Aliases : Solyc12g005320

Description : pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005320.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G05910 No alias Pectinacetylesterase family protein 0.06 OrthoFinder output from all 47 species
AT4G19410 No alias Pectinacetylesterase family protein 0.06 OrthoFinder output from all 47 species
AT5G26670 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
Adi_g053353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03040 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20025 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44826.t1 Aspi01Gene44826 pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G050400.1 Ceric.37G050400 pectin acetylesterase *(PAE) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G050500.1 Ceric.37G050500 pectin acetylesterase *(PAE) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07334 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08706 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30374 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 OrthoFinder output from all 47 species
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
GSVIVT01031342001 No alias Cell wall.pectin.modification and degradation.pectin... 0.01 OrthoFinder output from all 47 species
Gb_15309 No alias pectin acetylesterase 0.06 OrthoFinder output from all 47 species
Gb_28228 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os01g66840.1 LOC_Os01g66840 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10306500g0010 No alias Pectin acetylesterase 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10333321g0010 No alias Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10432685g0010 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
MA_8032g0010 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43584 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12003 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29610 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43083 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g42320 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39303 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 OrthoFinder output from all 47 species
Solyc08g005800.4.1 Solyc08g005800 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g074990.3.1 Solyc08g074990 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc12g019440.3.1 Solyc12g019440 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 35 374
No external refs found!