Solyc11g072990.1.1 (KCS3, Solyc11g072990)


Aliases : KCS3, Solyc11g072990

Description : 3-ketoacyl-CoA synthase (KCS)


Gene families : OG0012186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012186_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072990.1.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00045070 KCS12,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.08 OrthoFinder output from all 47 species
AMTR_s00178p00018030 KCS12,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.06 OrthoFinder output from all 47 species
AT2G28630 KCS12 3-ketoacyl-CoA synthase 12 0.06 OrthoFinder output from all 47 species
AT5G04530 KCS19 3-ketoacyl-CoA synthase 19 0.07 OrthoFinder output from all 47 species
GSVIVT01005975001 KCS12 Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 OrthoFinder output from all 47 species
GSVIVT01025052001 KCS12 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
LOC_Os02g56860.1 KCS12, LOC_Os02g56860 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
LOC_Os03g26530.1 KCS12, LOC_Os03g26530 3-ketoacyl-CoA synthase (KCS) 0.07 OrthoFinder output from all 47 species
LOC_Os10g33370.1 KCS12, LOC_Os10g33370 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species
Zm00001e001847_P001 KCS12, Zm00001e001847 3-ketoacyl-CoA synthase (KCS) 0.08 OrthoFinder output from all 47 species
Zm00001e004603_P002 KCS12, Zm00001e004603 3-ketoacyl-CoA synthase (KCS) 0.05 OrthoFinder output from all 47 species
Zm00001e016197_P001 KCS12, Zm00001e016197 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 334 415
IPR013601 FAE1_typ3_polyketide_synth 26 313
No external refs found!