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  5. Solyc11g072690.2.1

Solyc11g072690.2.1 (AtkdsA1, Solyc11g072690)


Aliases : AtkdsA1, Solyc11g072690

Description : KDO-8-phosphate synthase


Gene families : OG0008243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072690.2.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014617 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aop_g25833 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Dac_g14031 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Dde_g05206 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
GSVIVT01036737001 AtkdsA1 Cell wall.pectin.rhamnogalacturonan... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10784.2 AtkdsA1, LOC_Os12g10784 KDO-8-phosphate synthase 0.02 OrthoFinder output from all 47 species
Len_g10071 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Lfl_g17845 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Nbi_g06106 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ppi_g05612 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Sam_g17870 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Spa_g06260 AtkdsA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006218 DAHP1/KDSA 15 267
No external refs found!