Solyc11g072600.3.1 (RAP2.7, TOE1, Solyc11g072600)

Aliases : RAP2.7, TOE1, Solyc11g072600

Description : transcription factor (AP2)

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g072600.3.1
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00086450	ADAP,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00225230	AIL5, EMK, CHO1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00058p00216470	RAP2.7, TOE1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT5G17430	BBM	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g074051	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Adi_g088509	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Aev_g36629	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ala_g04901	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g28572	BBM	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g47612	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g20859	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Aob_g27594	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aop_g06262	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene03089.t1	WRI1, ATWRI1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene21780.t1	BBM, Aspi01Gene21780	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.12G002600.1	Ceric.12G002600	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.31G036600.1	Ceric.31G036600	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dac_g06510	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dde_g30317	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dde_g42409	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g06863	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01025307001	PLT2	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_00766	AP2, FLO2, FL1	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Gb_05487	DRG, CKC, CKC1, ANT	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Gb_11937	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Gb_18139	No alias	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Gb_39931	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Gb_41702	ADAP	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os06g05340.1	LOC_Os06g05340	transcription factor (AP2). RAM1-dependent transcription...	0.04	OrthoFinder output from all 47 species
LOC_Os06g43220.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os07g39110.2	LOC_Os07g39110	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os11g03540.1	WRI1, ATWRI1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Len_g45546	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_10005612g0010	ADAP	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_30905g0010	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
MA_86195g0010	PLT2	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_95471g0010	No alias	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Msp_g28024	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g28976	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ore_g37584	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Pir_g37453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pnu_g21617	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pp3c12_15970V3.1	Rap2.6L, Pp3c12_15970	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c12_16100V3.1	Rap2.6L, Pp3c12_16100	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019681	AP2, FLO2, FL1	not classified & original description: CDS=1-681	0.03	OrthoFinder output from all 47 species
Sam_g09902	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13728	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Sam_g37210	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Solyc09g007260.4.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Solyc11g061750.2.1	PLT2, Solyc11g061750	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Spa_g28499	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g38473	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Spa_g38474	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Tin_g40561	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e006752_P001	AP2, FLO2, FL1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Zm00001e011539_P001	DRG, CKC, CKC1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Zm00001e037501_P005	AP2, FLO2, FL1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Zm00001e038652_P002	DRG, CKC, CKC1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	159	208

External Links

No external refs found!

Solyc11g072600.3.1 (RAP2.7, TOE1, Solyc11g072600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation