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  5. Solyc11g069720.2.1

Solyc11g069720.2.1 (Solyc11g069720)


Aliases : Solyc11g069720

Description : platform ATPase (CDC48)


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g069720.2.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g114666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20068 CIP111 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14973 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0178.g056166 No alias platform ATPase CDC48 & original description: CDS=301-2751 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058064 No alias platform ATPase CDC48 & original description: CDS=1-2484 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021463.10 No alias Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
GSVIVT01010343001 emb1354, CDC48C Cell division control protein 48 homolog C... 0.03 OrthoFinder output from all 47 species
GSVIVT01025783001 CIP111 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g32887 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g12350.1 emb1354, CDC48C Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g03860 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13011 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12521 CIP111 platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13925 CDC48A, CDC48, ATCDC48 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 30 111
IPR041569 AAA_lid_3 398 438
IPR041569 AAA_lid_3 673 714
IPR003959 ATPase_AAA_core 518 651
IPR003959 ATPase_AAA_core 245 374
IPR004201 Cdc48_dom2 131 195
No external refs found!