Aliases : GATA11, Solyc11g069510
Description : transcription factor (GATA)
Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aop_g12583 | GATA9 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g05826 | GATA9 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.25G042500.1 | GATA22, CGA1,... | transcription factor *(A/B-GATA) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020610.74 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Tin_g18035 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 210 | 243 |
No external refs found! |