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  5. Solyc11g068690.2.1

Solyc11g068690.2.1 (Solyc11g068690)


Aliases : Solyc11g068690

Description : no hits & (original description: none)


Gene families : OG0005562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g068690.2.1

Target Alias Description ECC score Gene Family Method Actions
AT5G22320 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Adi_g000643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.128 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_25981 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73560.1 LOC_Os01g73560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g19470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g05860.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo412654 No alias No description available 0.06 OrthoFinder output from all 47 species
Zm00001e018532_P001 Zm00001e018532 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!