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  5. Solyc11g062390.3.1

Solyc11g062390.3.1 (Solyc11g062390)


Aliases : Solyc11g062390

Description : SCAB actin organisation regulator protein


Gene families : OG0004003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g062390.3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G26770 No alias plectin-related 0.03 OrthoFinder output from all 47 species
AT3G56480 No alias myosin heavy chain-related 0.03 OrthoFinder output from all 47 species
Adi_g000269 No alias regulatory protein *(SCAB) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Adi_g081261 No alias regulatory protein *(SCAB) of actin organisation &... 0.02 OrthoFinder output from all 47 species
Aev_g01224 No alias regulatory protein *(SCAB) of actin organisation &... 0.03 OrthoFinder output from all 47 species
Ala_g07932 No alias regulatory protein *(SCAB) of actin organisation &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene57655.t1 Aspi01Gene57655 regulatory protein *(SCAB) of actin organisation &... 0.03 OrthoFinder output from all 47 species
Ehy_g07728 No alias regulatory protein *(SCAB) of actin organisation &... 0.03 OrthoFinder output from all 47 species
LOC_Os03g24940.2 LOC_Os03g24940 SCAB actin organisation regulator protein 0.03 OrthoFinder output from all 47 species
MA_10431023g0010 No alias Stomatal closure-related actin-binding protein 1... 0.03 OrthoFinder output from all 47 species
Mp4g04360.1 No alias SCAB actin organisation regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g04504 No alias regulatory protein *(SCAB) of actin organisation &... 0.03 OrthoFinder output from all 47 species
Zm00001e001759_P001 Zm00001e001759 SCAB actin organisation regulator protein 0.04 OrthoFinder output from all 47 species
Zm00001e035697_P001 Zm00001e035697 SCAB actin organisation regulator protein 0.05 OrthoFinder output from all 47 species
Zm00001e038157_P004 Zm00001e038157 SCAB actin organisation regulator protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:00167620.0 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR041144 SCAB-PH 110 217
No external refs found!