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Aliases : Solyc11g042880
Description : no hits & (original description: none)
Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g042880.3.1 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G24605 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT4G35170 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22107.t1 | Aspi01Gene22107 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G091500.1 | Ceric.04G091500 | not classified & original description: pacid=50630876... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.33G056400.1 | Ceric.33G056400 | not classified & original description: pacid=50607285... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032090001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g44740.1 | LOC_Os02g44740 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g59330.1 | LOC_Os04g59330 | microtubule-interacting component CC of cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05235 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008965 | No alias | not classified & original description: CDS=1104-2096 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07963 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000854_P001 | Zm00001e000854 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015379_P001 | Zm00001e015379 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e030085_P001 | Zm00001e030085 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |