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  5. Solyc11g040227.1.1

Solyc11g040227.1.1 (CRK8, Solyc11g040227)


Aliases : CRK8, Solyc11g040227

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 155.0)


Gene families : OG0007355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g040227.1.1

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500337.1.1 Solyc00g500337 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc08g065145.1.1 ORF111A, Solyc08g065145 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 7 109
No external refs found!