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Aliases : NEF1, Solyc11g033282
Description : exine patterning factor (NEF1)
Gene families : OG0004275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004275_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g033282.1.1 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00233120 | NEF1,... | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G13390 | NEF1 | no exine formation 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087227 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g06738 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g29070 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044904 | NEF1 | exine patterning factor *(NEF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g37910 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z076600.1 | NEF1, Ceric.1Z076600 | exine patterning factor *(NEF1) & original description:... | 0.11 | OrthoFinder output from all 47 species | |
| Cre01.g018050 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g04975 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g03489 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04037 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001111001 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19950 | NEF1 | exine patterning factor (NEF1) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g32470.1 | NEF1, LOC_Os11g32470 | exine patterning factor (NEF1) | 0.14 | OrthoFinder output from all 47 species | |
| Len_g16443 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02354 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_106922g0010 | NEF1 | exine patterning factor (NEF1) | 0.02 | OrthoFinder output from all 47 species | |
| MA_302207g0010 | NEF1 | exine patterning factor (NEF1) | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g01090.1 | NEF1 | exine patterning factor (NEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03573 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g03839 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g08936 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10459 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0054.g014202 | NEF1 | exine patterning factor *(NEF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13515 | No alias | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo92814 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15321 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08980 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| CC | GO:0008303 | caspase complex | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016255 | attachment of GPI anchor to protein | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| CC | GO:0042765 | GPI-anchor transamidase complex | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |