1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g022400.1.1

Solyc11g022400.1.1 (Solyc11g022400)


Aliases : Solyc11g022400

Description : no description available(sp|q60ew9|ftip7_orysj : 954.0)


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g022400.1.1

Target Alias Description ECC score Gene Family Method Actions
Als_g30432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013224 No alias not classified & original description: CDS=1-3375 0.03 OrthoFinder output from all 47 species
Azfi_s0171.g055682 No alias not classified & original description: CDS=227-3172 0.02 OrthoFinder output from all 47 species
Ceric.04G011700.1 RPL10B, Ceric.04G011700 not classified & original description: pacid=50630755... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.14 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre06.g263650 No alias No description available 0.02 OrthoFinder output from all 47 species
Ppi_g40173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s2355.g028324 No alias not classified & original description: CDS=1-981 0.02 OrthoFinder output from all 47 species
Tin_g11990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 784 939
IPR000008 C2_dom 367 453
IPR000008 C2_dom 525 639
IPR000008 C2_dom 217 319
IPR000008 C2_dom 2 72
No external refs found!