1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g020760.3.1

Solyc11g020760.3.1 (Solyc11g020760)


Aliases : Solyc11g020760

Description : DNA translocase component FANCM of FANCM-MHF DNA remodeling complex


Gene families : OG0008514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g020760.3.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g079584 No alias DNA translocase component *(FANCM) of FANCM-MHF DNA... 0.03 OrthoFinder output from all 47 species
Ceric.36G062700.1 Ceric.36G062700 DNA translocase component *(FANCM) of FANCM-MHF DNA... 0.04 OrthoFinder output from all 47 species
Dcu_g03203 No alias DNA translocase component *(FANCM) of FANCM-MHF DNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01034779001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.07 OrthoFinder output from all 47 species
LOC_Os11g07870.1 LOC_Os11g07870 DNA translocase component FANCM of FANCM-MHF DNA... 0.03 OrthoFinder output from all 47 species
Mp1g21370.1 No alias DNA translocase component FANCM of FANCM-MHF DNA... 0.03 OrthoFinder output from all 47 species
Tin_g09795 No alias DNA translocase component *(FANCM) of FANCM-MHF DNA... 0.03 OrthoFinder output from all 47 species
Zm00001e024537_P001 Zm00001e024537 DNA translocase component FANCM of FANCM-MHF DNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 228 343
No external refs found!