1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g017420.2.1

Solyc11g017420.2.1 (Solyc11g017420)


Aliases : Solyc11g017420

Description : no hits & (original description: none)


Gene families : OG0003982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003982_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g017420.2.1

Target Alias Description ECC score Gene Family Method Actions
AT4G09630 No alias Protein of unknown function (DUF616) 0.03 OrthoFinder output from all 47 species
Aev_g08517 EMB2756 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37429 EMB2756 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14380 EMB2756 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0451.g070760 EMB2756 not classified & original description: CDS=1-1854 0.04 OrthoFinder output from all 47 species
Ceric.37G050700.1 EMB2756, Ceric.37G050700 not classified & original description: pacid=50616951... 0.05 OrthoFinder output from all 47 species
Dac_g14786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034490001 EMB2756 No description available 0.03 OrthoFinder output from all 47 species
Gb_41794 EMB2756 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g09170.1 EMB2756, LOC_Os11g09170 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g36635 EMB2756 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_368651g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27690.1 EMB2756 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g33300 EMB2756 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021365_P001 EMB2756, Zm00001e021365 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR006852 TOD1/MUCI70 379 698
No external refs found!