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  5. Solyc11g012270.2.1

Solyc11g012270.2.1 (SCN1, Solyc11g012270)


Aliases : SCN1, Solyc11g012270

Description : guanine nucleotide dissociation inhibitor (RopGDI)


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g012270.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00173830 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AT3G07880 SCN1 Immunoglobulin E-set superfamily protein 0.04 OrthoFinder output from all 47 species
Ceric.17G023500.1 SCN1, Ceric.17G023500 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Dcu_g00737 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Dde_g01953 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01003335001 SCN1 Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01030419001 SCN1 Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Msp_g21563 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sam_g08474 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Zm00001e031533_P001 SCN1, Zm00001e031533 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR000406 Rho_GDI 69 256
No external refs found!