Solyc11g011920.2.1 (GAD, GAD1, Solyc11g011920)

Aliases : GAD, GAD1, Solyc11g011920

Description : glutamate decarboxylase

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g011920.2.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00142920	GAD, GAD1,...	Amino acid metabolism.biosynthesis.glutamate...	0.06	OrthoFinder output from all 47 species
AT2G02010	GAD4	glutamate decarboxylase 4	0.04	OrthoFinder output from all 47 species
Als_g63120	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0375.g067252	GAD4	glutamate decarboxylase *(GAD) & original description: CDS=1-1713	0.02	OrthoFinder output from all 47 species
Ceric.17G022200.1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g15377	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011564001	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.03	OrthoFinder output from all 47 species
GSVIVT01011565001	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.04	OrthoFinder output from all 47 species
Gb_38320	GAD, GAD1	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os03g13300.1	GAD, GAD1, LOC_Os03g13300	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os03g51080.1	GAD, GAD1, LOC_Os03g51080	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
LOC_Os04g37460.1	GAD, GAD1, LOC_Os04g37460	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
MA_58668g0010	No alias	Glutamate decarboxylase 4 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp3g23860.1	GAD, GAD1	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Nbi_g15690	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g025530.3.1	GAD4, Solyc04g025530	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc05g054050.4.1	GAD, GAD1, Solyc05g054050	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
Spa_g55008	GAD2	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007985_P001	GAD4, Zm00001e007985	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
MF	GO:0008455	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	33	381

External Links

No external refs found!

Solyc11g011920.2.1 (GAD, GAD1, Solyc11g011920)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation