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  5. Solyc11g011480.2.1

Solyc11g011480.2.1 (Solyc11g011480)


Aliases : Solyc11g011480

Description : component NCT of gamma secretase complex


Gene families : OG0005563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g011480.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G52640 No alias Zn-dependent exopeptidases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g000735 No alias component *(NCT) of gamma secretase complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g13063 No alias component *(NCT) of gamma secretase complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G068000.1 Ceric.19G068000 component *(NCT) of gamma secretase complex & original... 0.02 OrthoFinder output from all 47 species
Cre06.g294400 No alias Protein modification.peptide maturation.endomembrane... 0.02 OrthoFinder output from all 47 species
GSVIVT01030701001 No alias Protein modification.peptide maturation.endomembrane... 0.04 OrthoFinder output from all 47 species
Mp5g17410.1 No alias component NCT of gamma secretase complex 0.02 OrthoFinder output from all 47 species
Tin_g16972 No alias component *(NCT) of gamma secretase complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR041084 Ncstrn_small 48 205
No external refs found!