1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g011030.2.1

Solyc11g011030.2.1 (TIFY10B, JAZ2, Solyc11g011030)


Aliases : TIFY10B, JAZ2, Solyc11g011030

Description : transcription factor (TIFY)


Gene families : OG0002307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002307_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g011030.2.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00087530 TIFY8,... RNA biosynthesis.transcriptional activation.TIFY... 0.03 OrthoFinder output from all 47 species
Adi_g025685 TIFY8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06590.t1 TIFY8, Aspi01Gene06590 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3945.g117362 TIFY8 not classified & original description: CDS=464-1717 0.03 OrthoFinder output from all 47 species
Dde_g30972 TIFY8 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21637 TIFY8 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_82585g0010 TIFY8 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Msp_g31087 TIFY8 TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29537 TIFY8 TIFY-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR018467 CCT_CS 176 199
IPR010399 Tify_dom 103 134
No external refs found!