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  5. Solyc10g083150.3.1

Solyc10g083150.3.1 (Solyc10g083150)


Aliases : Solyc10g083150

Description : component MPE1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex


Gene families : OG0001168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g083150.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G057500.1 Ceric.39G057500 component *(MPE1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Cre12.g543303 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g06496 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Dcu_g12334 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.05 OrthoFinder output from all 47 species
Mp2g17650.1 No alias component MPE1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Nbi_g35870 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Ore_g26290 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Pir_g15664 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Sam_g39118 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Tin_g27178 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Zm00001e012354_P001 Zm00001e012354 E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025829 Zn_knuckle_CX2CX3GHX4C 217 237
IPR014891 DWNN_domain 3 76
No external refs found!