Aliases : TGA2, AHBP-1B, Solyc10g080780
Description : transcription factor (TGA)
Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene43559.t1 | TGA2, AHBP-1B,... | NPR1-interactive transcription factor *(TGA) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.23G021100.1 | TGA2, AHBP-1B,... | TGA-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g17296 | TGA2, AHBP-1B | NPR1-interactive transcription factor *(TGA) & original... | 0.05 | OrthoFinder output from all 47 species | |
Len_g02330 | TGA2, AHBP-1B | NPR1-interactive transcription factor *(TGA) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g62730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g074320.3.1 | bZIP21, TGA9,... | transcription factor (bZIP). transcription factor (TGA) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025422 | TGA_domain | 66 | 141 |
No external refs found! |