Solyc10g080780.2.1 (TGA2, AHBP-1B, Solyc10g080780)


Aliases : TGA2, AHBP-1B, Solyc10g080780

Description : transcription factor (TGA)


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g080780.2.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene43559.t1 TGA2, AHBP-1B,... NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G021100.1 TGA2, AHBP-1B,... TGA-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g17296 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.05 OrthoFinder output from all 47 species
Len_g02330 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g62730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g074320.3.1 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025422 TGA_domain 66 141
No external refs found!