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  5. Solyc10g079890.2.1

Solyc10g079890.2.1 (Solyc10g079890)


Aliases : Solyc10g079890

Description : no description available(sp|q2qy10|cbp_orysj : 306.0)


Gene families : OG0002864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g079890.2.1

Target Alias Description ECC score Gene Family Method Actions
AT5G04170 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Adi_g014107 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036121001 No alias Probable calcium-binding protein CML48 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os11g04480.1 LOC_Os11g04480 no description available(sp|q2qy10|cbp_orysj : 361.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g04240.1 LOC_Os12g04240 no description available(sp|q2qy10|cbp_orysj : 362.0) 0.06 OrthoFinder output from all 47 species
Nbi_g24952 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024085_P001 Zm00001e024085 no description available(sp|q2qy10|cbp_orysj : 337.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 174 196
IPR002048 EF_hand_dom 239 265
No external refs found!