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  5. Solyc10g076330.3.1

Solyc10g076330.3.1 (Solyc10g076330)


Aliases : Solyc10g076330

Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g076330.3.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00128180 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.05 OrthoFinder output from all 47 species
Cba_g03364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
Gb_18799 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 270.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g07140.1 LOC_Os01g07140 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 121.0) 0.03 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_26274g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g13060.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 261.0) 0.01 OrthoFinder output from all 47 species
Msp_g35170 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g00668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 17 143
IPR006652 Kelch_1 476 530
No external refs found!