- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc10g054900
Description : Proline-rich protein 4 OS=Arabidopsis thaliana (sp|q9t0i5|prp4_arath : 114.0)
Gene families : OG0009919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009919_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g054900.2.1 | |
| Cluster | HCCA: Cluster_146 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00194550 | evm_27.TU.AmTr_v1... | Proline-rich protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT2G21140 | PRP2, ATPRP2 | proline-rich protein 2 | 0.08 | OrthoFinder output from all 47 species | |
| AT4G38770 | ATPRP4, PRP4 | proline-rich protein 4 | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024076001 | ATPRP4, PRP4 | Proline-rich protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37950 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g14130.1 | PRP2, ATPRP2,... | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g14140.1 | LOC_Os03g14140 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g05750.1 | ATPRP4, PRP4,... | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g05790.1 | LOC_Os10g05790 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g05820.1 | LOC_Os10g05820 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g05860.1 | LOC_Os10g05860 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g05910.1 | LOC_Os10g05910 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g05930.1 | LOC_Os10g05930 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g05950.1 | LOC_Os10g05950 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g05980.1 | LOC_Os10g05980 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g05990.1 | LOC_Os10g05990 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g06000.1 | LOC_Os10g06000 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435425g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_358712g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002644_P001 | ATPRP4, PRP4,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |