1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g054440.3.1

Solyc10g054440.3.1 (ADC2, SPE2, ATADC2,...)


Aliases : ADC2, SPE2, ATADC2, Solyc10g054440

Description : arginine decarboxylase


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g054440.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00026140 ADC2, SPE2,... Polyamine... 0.03 OrthoFinder output from all 47 species
AT2G16500 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase 1 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001110 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: CDS=1-2103 0.02 OrthoFinder output from all 47 species
Ceric.14G033900.1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.31G061900.1 ADC1, ARGDC,... EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_39070 ADC2, SPE2, ATADC2 arginine decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os04g01690.3 ADC1, ARGDC,... arginine decarboxylase 0.05 OrthoFinder output from all 47 species
Nbi_g01284 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 141 394
No external refs found!