Solyc10g046970.2.1 (TLP10, AtTLP10, Solyc10g046970)

Aliases : TLP10, AtTLP10, Solyc10g046970

Description : transcription factor (TUB)

Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g046970.2.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00040910	TLP10, AtTLP10,...	RNA biosynthesis.transcriptional activation.TUB...	0.04	OrthoFinder output from all 47 species
AT1G25280	TLP10, AtTLP10	tubby like protein 10	0.04	OrthoFinder output from all 47 species
AT1G47270	TLP6, AtTLP6	tubby like protein 6	0.01	OrthoFinder output from all 47 species
AT1G53320	AtTLP7, TLP7	tubby like protein 7	0.01	OrthoFinder output from all 47 species
AT2G47900	AtTLP3, TLP3	tubby like protein 3	0.03	OrthoFinder output from all 47 species
Adi_g008982	AtTLP1, TLP1	TUB-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g060657	AtTLP1, TLP1	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g115192	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28748	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01271	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g11343	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene71057.t1	AtTLP3, TLP3,...	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene72676.t1	AtTLP3, TLP3,...	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0028.g023784	AtTLP3, TLP3	TUB-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.1Z003500.1	AtTLP3, TLP3,...	TUB-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.39G011000.1	AtTLP3, TLP3,...	TUB-type transcription factor & original description:...	0.08	OrthoFinder output from all 47 species
Dcu_g12682	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g06633	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g04759	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g24072	TLP10, AtTLP10	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010999001	AtTLP3, TLP3	RNA biosynthesis.transcriptional activation.TUB...	0.05	OrthoFinder output from all 47 species
GSVIVT01014191001	No alias	RNA biosynthesis.transcriptional activation.TUB...	0.04	OrthoFinder output from all 47 species
GSVIVT01017810001	AtTLP3, TLP3	RNA biosynthesis.transcriptional activation.TUB...	0.02	OrthoFinder output from all 47 species
GSVIVT01029701001	TLP10, AtTLP10	RNA biosynthesis.transcriptional activation.TUB...	0.07	OrthoFinder output from all 47 species
GSVIVT01034528001	AtTLP1, TLP1	RNA biosynthesis.transcriptional activation.TUB...	0.07	OrthoFinder output from all 47 species
Gb_21935	TLP10, AtTLP10	transcription factor (TUB)	0.02	OrthoFinder output from all 47 species
Gb_38150	AtTLP3, TLP3	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
Gb_38151	AtTLP3, TLP3	transcription factor (TUB)	0.03	OrthoFinder output from all 47 species
LOC_Os01g48370.1	AtTLP7, TLP7,...	transcription factor (TUB)	0.02	OrthoFinder output from all 47 species
LOC_Os01g64700.2	TLP10, AtTLP10,...	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
LOC_Os02g47640.1	TLP2, AtTLP2,...	transcription factor (TUB)	0.02	OrthoFinder output from all 47 species
LOC_Os05g36190.1	TLP10, AtTLP10,...	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
LOC_Os08g01290.5	TLP10, AtTLP10,...	transcription factor (TUB)	0.05	OrthoFinder output from all 47 species
LOC_Os12g06630.2	TLP10, AtTLP10,...	transcription factor (TUB)	0.02	OrthoFinder output from all 47 species
Len_g04744	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g17746	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g09266	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_87289g0010	AtTLP3, TLP3	transcription factor (TUB)	0.02	OrthoFinder output from all 47 species
Mp6g01640.1	AtTLP3, TLP3	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
Nbi_g03652	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05272	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01637	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g03056	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g04550	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003029	AtTLP3, TLP3	TUB-type transcription factor & original description: CDS=1-1392	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018709	AtTLP3, TLP3	TUB-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g14642	No alias	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g14941	No alias	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo83983	AtTLP3, TLP3	RNA biosynthesis.transcriptional activation.TUB...	0.04	OrthoFinder output from all 47 species
Smo85745	AtTLP3, TLP3	RNA biosynthesis.transcriptional activation.TUB...	0.04	OrthoFinder output from all 47 species
Solyc02g085130.4.1	TLP2, AtTLP2,...	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
Spa_g28641	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g01734	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g05118	AtTLP3, TLP3	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001672_P001	AtTLP3, TLP3,...	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
Zm00001e019166_P001	TLP10, AtTLP10,...	transcription factor (TUB)	0.07	OrthoFinder output from all 47 species
Zm00001e024284_P002	TLP10, AtTLP10,...	transcription factor (TUB)	0.09	OrthoFinder output from all 47 species
Zm00001e028052_P001	AtTLP7, TLP7,...	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000007	Tubby_C	116	421
IPR001810	F-box_dom	52	105

External Links

No external refs found!

Solyc10g046970.2.1 (TLP10, AtTLP10, Solyc10g046970)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation