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  5. Solyc10g009290.1.1

Solyc10g009290.1.1 (Solyc10g009290)


Aliases : Solyc10g009290

Description : transcription factor (bHLH)


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g009290.1.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00048410 BHLH42, TT8,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00127980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00121p00026620 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.06 OrthoFinder output from all 47 species
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.07 OrthoFinder output from all 47 species
AT4G00870 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09820 BHLH42, TT8 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17880 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g015670 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058724 ATMYC2, MYC2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099729 NIG1, ATNIG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06112 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20262 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02307 AIB, ATAIB bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13949 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15859 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15590 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21686 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30820 ATMYC2, MYC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35731 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37617 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33982 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08037 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29710 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05305.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22992.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53938.t1 Aspi01Gene53938 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53959.t1 Aspi01Gene53959 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046110 No alias bHLH-type transcription factor & original description: CDS=1-2184 0.02 OrthoFinder output from all 47 species
Cba_g20851 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G061300.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G048200.1 Ceric.33G048200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01751 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32437 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43924 BHLH42, TT8 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03766 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07082 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09116 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10001 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_28786 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_36294 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g50940.1 AIB, ATAIB,... transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os04g47040.1 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g11020.1 BHLH42, TT8,... Basic helix-loop-helix protein A OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
LOC_Os10g42430.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Len_g10776 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06465 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03760 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09799 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13494 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10858 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24853 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13609 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15562 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29687 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000372 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-1683 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010825 No alias bHLH-type transcription factor & original description: CDS=1-2244 0.03 OrthoFinder output from all 47 species
Solyc08g008600.3.1 Solyc08g008600 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g26910 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38314 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49121 ATMYC2, MYC2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52382 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55797 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002421_P001 ATMYC2, MYC2,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e020021_P001 AIB, ATAIB,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e037785_P002 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 28 205
IPR011598 bHLH_dom 270 315
No external refs found!