Solyc10g008220.4.1 (Solyc10g008220)

Aliases : Solyc10g008220

Description : Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum (sp|q6l438|r1a6_solde : 298.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g008220.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00190p00027950	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00190p00029950	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00202p00037220	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT1G58390	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	OrthoFinder output from all 47 species
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT3G07040	RPM1, RPS3	NB-ARC domain-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.03	OrthoFinder output from all 47 species
AT5G48620	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
Adi_g060852	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g062378	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g22709	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30165	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01026725001	No alias	Putative disease resistance protein At1g50180...	0.04	OrthoFinder output from all 47 species
GSVIVT01026728001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01026750001	HRT, RCY1, RPP8	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.04	OrthoFinder output from all 47 species
Gb_25815	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.04	OrthoFinder output from all 47 species
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.03	OrthoFinder output from all 47 species
Gb_40740	RPM1, RPS3	Putative disease resistance protein RGA3 OS=Solanum...	0.07	OrthoFinder output from all 47 species
LOC_Os04g21890.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os08g31800.1	LOC_Os08g31800	no description available(sp\|q2r8l1\|rga5s_orysj : 394.0)	0.03	OrthoFinder output from all 47 species
LOC_Os10g10360.3	LOC_Os10g10360	Probable disease resistance protein At1g58390...	0.05	OrthoFinder output from all 47 species
LOC_Os11g11770.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e024479_P001	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	198	325
IPR002182	NB-ARC	162	196
IPR041118	Rx_N	5	89

External Links

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Solyc10g008220.4.1 (Solyc10g008220)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation