Solyc10g007320.3.1 (HEME1, Solyc10g007320)

Aliases : HEME1, Solyc10g007320

Description : uroporphyrinogen III decarboxylase

Gene families : OG0002087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g007320.3.1
Cluster	HCCA: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00219480	HEME2,...	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
AMTR_s00075p00091010	HEME1,...	Coenzyme metabolism.tetrapyrrol...	0.09	OrthoFinder output from all 47 species
AT2G40490	HEME2	Uroporphyrinogen decarboxylase	0.27	OrthoFinder output from all 47 species
AT3G14930	HEME1	Uroporphyrinogen decarboxylase	0.16	OrthoFinder output from all 47 species
Adi_g009396	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04033	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g13341	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g01270	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07294	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g19735	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g61203	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0049.g030928	HEME1	EC_4.1 carbon-carbon lyase & original description: CDS=53-1354	0.09	OrthoFinder output from all 47 species
Ceric.27G010500.1	HEME1, Ceric.27G010500	EC_4.1 carbon-carbon lyase & original description:...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.48	HEME2	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
Cre02.g073700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.06	OrthoFinder output from all 47 species
Cre02.g076300	HEME1	Coenzyme metabolism.tetrapyrrol...	0.06	OrthoFinder output from all 47 species
Cre11.g467700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.06	OrthoFinder output from all 47 species
Dac_g08545	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g01104	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g15483	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g09522	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g01091	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02496	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01014200001	HEME1	Coenzyme metabolism.tetrapyrrol...	0.08	OrthoFinder output from all 47 species
GSVIVT01032710001	HEME2	Coenzyme metabolism.tetrapyrrol...	0.19	OrthoFinder output from all 47 species
Gb_19378	HEME2	uroporphyrinogen III decarboxylase	0.1	OrthoFinder output from all 47 species
LOC_Os03g21900.1	HEME2, LOC_Os03g21900	uroporphyrinogen III decarboxylase	0.08	OrthoFinder output from all 47 species
Len_g09571	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.08	OrthoFinder output from all 47 species
Len_g17519	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.07	OrthoFinder output from all 47 species
Lfl_g02794	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g02865	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.07	OrthoFinder output from all 47 species
MA_10435805g0010	HEME1	uroporphyrinogen III decarboxylase	0.08	OrthoFinder output from all 47 species
MA_10435949g0010	HEME2	uroporphyrinogen III decarboxylase	0.07	OrthoFinder output from all 47 species
Mp1g00080.1	HEME2	uroporphyrinogen III decarboxylase	0.18	OrthoFinder output from all 47 species
Nbi_g04176	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.1	OrthoFinder output from all 47 species
Nbi_g13179	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g00935	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11672	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g02424	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014871	HEME1	EC_4.1 carbon-carbon lyase & original description: CDS=111-1343	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017290	HEME2	EC_4.1 carbon-carbon lyase & original description: CDS=109-1317	0.08	OrthoFinder output from all 47 species
Sam_g06891	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.08	OrthoFinder output from all 47 species
Sam_g15628	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Smo231982	HEME1	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Smo438672	HEME2	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
Spa_g06611	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.11	OrthoFinder output from all 47 species
Spa_g09313	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g01749	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001594_P001	HEME2, Zm00001e001594	uroporphyrinogen III decarboxylase	0.1	OrthoFinder output from all 47 species
Zm00001e027896_P001	HEME1, Zm00001e027896	uroporphyrinogen III decarboxylase	0.07	OrthoFinder output from all 47 species
Zm00001e027899_P002	HEME1, Zm00001e027899	uroporphyrinogen III decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	66	402

External Links

No external refs found!

Solyc10g007320.3.1 (HEME1, Solyc10g007320)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation