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Aliases : Solyc10g006700
Description : Calcium-binding protein KRP1 OS=Arabidopsis thaliana (sp|o81831|carp1_arath : 129.0)
Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g006700.1.1 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00234p00014000 | evm_27.TU.AmTr_v1... | Calcium-binding protein KIC OS=Arabidopsis thaliana | 0.1 | OrthoFinder output from all 47 species | |
| AMTR_s00234p00015090 | evm_27.TU.AmTr_v1... | Calcium-binding protein KIC OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AT4G27280 | No alias | Calcium-binding EF-hand family protein | 0.16 | OrthoFinder output from all 47 species | |
| AT5G54490 | PBP1 | pinoid-binding protein 1 | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g087432 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g115388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09810 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g15929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g23750 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g59479 | PBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02623 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g22275 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70045 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene16361.t1 | PBP1, Aspi01Gene16361 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene49045.t1 | PBP1, Aspi01Gene49045 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63044.t1 | PBP1, Aspi01Gene63044 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G067100.1 | PBP1, Ceric.18G067100 | not classified & original description: pacid=50622258... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G000200.1 | Ceric.24G000200 | not classified & original description: pacid=50629224... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.24G000300.1 | Ceric.24G000300 | not classified & original description: pacid=50628799... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.30G075700.1 | PBP1, Ceric.30G075700 | not classified & original description: pacid=50608449... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.30G075800.1 | PBP1, Ceric.30G075800 | not classified & original description: pacid=50608432... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.30G075900.1 | PBP1, Ceric.30G075900 | not classified & original description: pacid=50609408... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00624 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g00157 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014539001 | PBP1 | Calcium-binding protein KRP1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Gb_10402 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17267 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30618 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_30620 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g03020.1 | LOC_Os02g03020 | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g46950.1 | LOC_Os06g46950 | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.17 | OrthoFinder output from all 47 species | |
| Len_g01599 | PBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10168324g0010 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10212526g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_1999194g0010 | No alias | Calcium-binding protein KRP1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_2285714g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_25900g0010 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.1 | OrthoFinder output from all 47 species | |
| MA_25900g0020 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_32393g0010 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_48747g0010 | No alias | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_7489059g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_8085699g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09603 | PBP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g36268 | PBP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09084 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25675 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57595 | PBP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g26313 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12034 | PBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g25489 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g079720.1.1 | PBP1, Solyc02g079720 | Calcium-binding protein KRP1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56723 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g56724 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g57374 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e013045_P001 | Zm00001e013045 | Calcium-binding protein KIC OS=Arabidopsis thaliana... | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |