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  5. Solyc10g006390.3.1

Solyc10g006390.3.1 (DDL, Solyc10g006390)


Aliases : DDL, Solyc10g006390

Description : pri-miRNA-DCL1 association factor (DAWDLE)


Gene families : OG0005544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006390.3.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Adi_g115808 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species
Aev_g46219 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.02 OrthoFinder output from all 47 species
Als_g14205 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species
Als_g21181 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.02 OrthoFinder output from all 47 species
Azfi_s0301.g063701 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.04 OrthoFinder output from all 47 species
Ceric.09G053400.1 DDL, Ceric.09G053400 pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.05 OrthoFinder output from all 47 species
Cre09.g390430 DDL RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g11124 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46780.1 DDL, LOC_Os05g46780 pri-miRNA-DCL1 association factor (DAWDLE) 0.07 OrthoFinder output from all 47 species
Lfl_g04708 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.02 OrthoFinder output from all 47 species
Mp7g08770.1 DDL pri-miRNA-DCL1 association factor (DAWDLE) 0.05 OrthoFinder output from all 47 species
Ore_g18493 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species
Pir_g07028 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species
Sam_g28339 No alias pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.05 OrthoFinder output from all 47 species
Spa_g49852 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species
Zm00001e031475_P002 DDL, Zm00001e031475 pri-miRNA-DCL1 association factor (DAWDLE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 425 505
No external refs found!