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  5. Solyc10g005190.1.1

Solyc10g005190.1.1 (RSH4, Solyc10g005190)


Aliases : RSH4, Solyc10g005190

Description : no hits & (original description: none)


Gene families : OG0017011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005190.1.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G30850 RSH4 root hair specific 4 0.04 OrthoFinder output from all 47 species
AT2G34910 No alias BEST Arabidopsis thaliana protein match is: root hair... 0.14 OrthoFinder output from all 47 species
AT4G20190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.17 OrthoFinder output from all 47 species
LOC_Os06g37600.1 RSH4, LOC_Os06g37600 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!