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  5. Solyc10g005180.3.1

Solyc10g005180.3.1 (AtCEST, CEST, Solyc10g005180)


Aliases : AtCEST, CEST, Solyc10g005180

Description : Y3IP1 protein involved in PS-I assembly


Gene families : OG0005396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005180.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00062270 AtCEST, CEST,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT5G44650 AtCEST, CEST CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST);... 0.08 OrthoFinder output from all 47 species
Adi_g007068 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.06 OrthoFinder output from all 47 species
Adi_g080844 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.06 OrthoFinder output from all 47 species
Aev_g10970 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g22544 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.02 OrthoFinder output from all 47 species
Als_g13014 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.08 OrthoFinder output from all 47 species
Aob_g02865 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.06 OrthoFinder output from all 47 species
Aop_g02076 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0147.g053059 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G019700.1 AtCEST, CEST,... protein involved in PS-I assembly *(Y3IP1) & original... 0.05 OrthoFinder output from all 47 species
Cre06.g280650 AtCEST, CEST Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Dac_g00413 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g14211 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.08 OrthoFinder output from all 47 species
Dde_g14729 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02141 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01037088001 AtCEST, CEST Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Gb_22829 AtCEST, CEST Y3IP1 protein involved in PS-I assembly 0.07 OrthoFinder output from all 47 species
LOC_Os01g58470.1 AtCEST, CEST,... Y3IP1 protein involved in PS-I assembly 0.12 OrthoFinder output from all 47 species
Lfl_g08170 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.06 OrthoFinder output from all 47 species
MA_7653147g0010 AtCEST, CEST Y3IP1 protein involved in PS-I assembly 0.03 OrthoFinder output from all 47 species
Mp1g15110.1 AtCEST, CEST Y3IP1 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
Msp_g01433 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.08 OrthoFinder output from all 47 species
Nbi_g03468 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g08727 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021213 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.07 OrthoFinder output from all 47 species
Sam_g13707 No alias protein involved in PS-I assembly *(Y3IP1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g13142 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e019564_P001 AtCEST, CEST,... Y3IP1 protein involved in PS-I assembly 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!