Solyc10g005110.3.1 (ATCPO-I, LIN2, HEMF1,...)

Aliases : ATCPO-I, LIN2, HEMF1, Solyc10g005110

Description : oxygen-dependent coproporphyrinogen III oxidase (HemF)

Gene families : OG0002326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002326_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g005110.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00226710	ATCPO-I, LIN2,...	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
AT1G03475	ATCPO-I, LIN2, HEMF1	Coproporphyrinogen III oxidase	0.16	OrthoFinder output from all 47 species
Adi_g019565	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g24817	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Ceric.07G038100.1	ATCPO-I, LIN2,...	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Ceric.38G006300.1	ATCPO-I, LIN2,...	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000471.12	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.08	OrthoFinder output from all 47 species
Cre02.g092600	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.1	OrthoFinder output from all 47 species
Dcu_g50906	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015906001	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.16	OrthoFinder output from all 47 species
Len_g00546	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.06	OrthoFinder output from all 47 species
Lfl_g01305	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.02	OrthoFinder output from all 47 species
MA_393193g0010	ATCPO-I, LIN2, HEMF1	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.04	OrthoFinder output from all 47 species
MA_73740g0010	ATCPO-I, LIN2, HEMF1	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.04	OrthoFinder output from all 47 species
Mp3g17410.1	ATCPO-I, LIN2, HEMF1	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.17	OrthoFinder output from all 47 species
Msp_g01613	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.05	OrthoFinder output from all 47 species
Nbi_g00642	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Ore_g20475	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.05	OrthoFinder output from all 47 species
Ore_g29823	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Pir_g34333	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.02	OrthoFinder output from all 47 species
Pnu_g18858	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Sam_g37582	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Smo131328	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.05	OrthoFinder output from all 47 species
Spa_g09845	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Zm00001e006977_P001	ATCPO-I, LIN2,...	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004109	coproporphyrinogen oxidase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0004655	porphobilinogen synthase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001260	Coprogen_oxidase_aer	95	398

External Links

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Solyc10g005110.3.1 (ATCPO-I, LIN2, HEMF1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation