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  5. Solyc09g091920.3.1

Solyc09g091920.3.1 (Solyc09g091920)


Aliases : Solyc09g091920

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana (sp|q9fz86|pdcb3_arath : 102.0)


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g091920.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00028p00159770 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00110p00143620 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.06 OrthoFinder output from all 47 species
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G29380 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G79480 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G03505 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G30933 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G05430 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.06 OrthoFinder output from all 47 species
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.11 OrthoFinder output from all 47 species
Adi_g015334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04282.t1 Aspi01Gene04282 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08830.t1 Aspi01Gene08830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17170.t1 Aspi01Gene17170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58702.t1 Aspi01Gene58702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62556.t1 Aspi01Gene62556 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0067.g036165 No alias not classified & original description: CDS=89-637 0.02 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063260 No alias not classified & original description: CDS=100-789 0.03 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.03 OrthoFinder output from all 47 species
Ceric.05G008700.1 Ceric.05G008700 not classified & original description: pacid=50577231... 0.03 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.09 OrthoFinder output from all 47 species
Ceric.27G008500.1 Ceric.27G008500 not classified & original description: pacid=50604777... 0.02 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.08 OrthoFinder output from all 47 species
Ceric.36G000700.1 Ceric.36G000700 not classified & original description: pacid=50569024... 0.03 OrthoFinder output from all 47 species
Ceric.37G009700.1 Ceric.37G009700 not classified & original description: pacid=50616747... 0.08 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.03 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g54910.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43690.1 LOC_Os05g43690 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g34660.1 PDCB5, LOC_Os06g34660 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36129 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_158566g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_8718849g0010 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g18020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39199 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23289 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g55633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007451 No alias not classified & original description: CDS=31-672 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021389 No alias not classified & original description: CDS=86-517 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024478 No alias not classified & original description: CDS=949-2307 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025725 No alias not classified & original description: CDS=1-396 0.03 OrthoFinder output from all 47 species
Sam_g24668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g09804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Zm00001e022608_P001 Zm00001e022608 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e037118_P002 PDCB5, Zm00001e037118 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 25 96
No external refs found!