Aliases : GATA1, Solyc09g091250
Description : transcription factor (GATA)
Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00056p00080350 | GATA9,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g16293 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.17G054000.1 | GATA5, Ceric.17G054000 | transcription factor *(A/B-GATA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g01502 | GATA9 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g19757 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g06344 | GATA5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g22038 | GATA11 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g31994 | GATA23 | transcription factor *(A/B-GATA) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g37666 | BME3-ZF, BME3, GATA8 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g07696 | No alias | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g23914 | No alias | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g14454 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007391_P002 | GATA5, Zm00001e007391 | transcription factor (GATA) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018438_P001 | GATA4, Zm00001e018438 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 195 | 229 |
No external refs found! |