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  5. Solyc09g090160.3.1

Solyc09g090160.3.1 (XBAT35, Solyc09g090160)


Aliases : XBAT35, Solyc09g090160

Description : RING-HC-class E3 ligase


Gene families : OG0001126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090160.3.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Als_g08584 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10869 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g255050 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g09051 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14943 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18417 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g26490.1 XBAT35, LOC_Os07g26490 RING-HC-class E3 ligase 0.05 OrthoFinder output from all 47 species
Lfl_g05495 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04580 XBAT35 E3 ubiquiTin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033402_P002 XBAT35, Zm00001e033402 RING-HC-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0017003 protein-heme linkage IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 40 69
No external refs found!