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  5. Solyc09g075450.3.1

Solyc09g075450.3.1 (FUM1, Solyc09g075450)


Aliases : FUM1, Solyc09g075450

Description : fumarase


Gene families : OG0004044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g075450.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G47510 FUM1 fumarase 1 0.12 OrthoFinder output from all 47 species
Aev_g04030 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0245.g059961 FUM1 EC_4.2 carbon-oxygen lyase & original description: CDS=241-1770 0.03 OrthoFinder output from all 47 species
Dcu_g02907 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g21950.1 FUM1, LOC_Os03g21950 fumarase 0.18 OrthoFinder output from all 47 species
Len_g11464 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17523 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65520 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00674 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_19500V3.1 FUM1, Pp3c23_19500 FUMARASE 2 0.03 OrthoFinder output from all 47 species
Smo113300 FUM1 Cellular respiration.tricarboxylic acid cycle.fumarase 0.03 OrthoFinder output from all 47 species
Zm00001e001600_P001 FUM1, Zm00001e001600 fumarase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR022761 Fumarate_lyase_N 44 372
IPR018951 Fumarase_C_C 438 491
No external refs found!