Aliases : AXR6, ATCUL1, CUL1, Solyc09g074680
Description : scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3 ligase complexes
Gene families : OG0001888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001888_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g34097 | AXR6, ATCUL1, CUL1 | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g24807 | AXR6, ATCUL1, CUL1 | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G004800.1 | AXR6, ATCUL1,... | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04834 | AXR6, ATCUL1, CUL1 | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02717 | AXR6, ATCUL1, CUL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010966001 | AXR6, ATCUL1, CUL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017738001 | AXR6, ATCUL1, CUL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16689 | AXR6, ATCUL1, CUL1 | scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... | 0.02 | OrthoFinder output from all 47 species | |
Len_g59431 | AXR6, ATCUL1, CUL1 | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Mp8g03110.1 | AXR6, ATCUL1, CUL1 | scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g06115 | AXR6, ATCUL1, CUL1 | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g01372 | AXR6, ATCUL1, CUL1 | scaffold component *(CUL1) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040431_P004 | AXR6, ATCUL1,... | scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
MF | GO:0031625 | ubiquitin protein ligase binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |